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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11635472 chr15:63975690 T/C VCX chrX:7810303-7812184:+ 0.34 5.95 5.92E-9 Box Plot
BLCA rs11636351 chr15:64117338 T/C VCX chrX:7810303-7812184:+ 0.35 6.13 2.18E-9 Box Plot
BLCA rs11639343 chr15:64057887 C/T VCX chrX:7810303-7812184:+ 0.35 6.07 3.15E-9 Box Plot
BLCA rs116507113 chr5:99622736 T/G CT47A9 chrX:120077415-120080737:- 0.23 7.03 9.63E-12 Box Plot
BLCA rs11665422 chr18:67788395 A/G C18orf55 chr18:71815746-71826204:+ 0.96 7.61 2.14E-13 Box Plot
BLCA rs11665422 chr18:67788395 A/G CTDP1 chr18:77439801-77516623:+ 0.86 6.47 3.05E-10 Box Plot
BLCA rs11665422 chr18:67788395 A/G FECH chr18:55215515-55254004:- 0.72 6.1 2.66E-9 Box Plot
BLCA rs11665422 chr18:67788395 A/G HAUS1 chr18:43684298-43708299:+ 0.67 6.13 2.24E-9 Box Plot
BLCA rs11665422 chr18:67788395 A/G HDHD2 chr18:44633774-44676891:- 0.74 6.11 2.49E-9 Box Plot
BLCA rs11665422 chr18:67788395 A/G KIAA1468 chr18:59854491-59975062:+ 0.7 7.36 1.13E-12 Box Plot
BLCA rs11665422 chr18:67788395 A/G LOC400657 chr18:72259012-72265071:- 0.84 7.04 9.22E-12 Box Plot
BLCA rs11665422 chr18:67788395 A/G MBD2 chr18:51677971-51751158:- 0.77 6.66 9.35E-11 Box Plot
BLCA rs11665422 chr18:67788395 A/G ME2 chr18:48405104-48480627:+ 0.77 6.24 1.19E-9 Box Plot
BLCA rs11665422 chr18:67788395 A/G MEX3C chr18:48700920-48744674:- 0.68 5.99 4.89E-9 Box Plot
BLCA rs11665422 chr18:67788395 A/G NARS chr18:55267888-55289445:- 0.89 7.88 3.37E-14 Box Plot